Publications by Year: 2013

2013
Gustafsdottir SM, Ljosa V, Sokolnicki KL, Wilson JA, Walpita D, Kemp MM, Seiler KP, Carrel HA, Golub TR, Schreiber SL, Clemons PA, Carpenter AE, Shamji AF. Multiplex cytological profiling assay to measure diverse cellular states. [Internet]. PLoS One 2013;8(12):e80999. Publisher's Version

[**Authors Gustafsdottir, SM and Ljosa, V contributed equally.]
[*Authors Clemons, PA, Carpenter, AE, and Shamji, AF contributed equally.]

Ljosa V, Caie PD, ter Horst R, Sokolnicki KL, Jenkins EL, Daya S, Roberts ME, Jones TR, Singh S, Genovesio A, Clemons PA, Carragher NO, Carpenter AE. Comparison of Methods for Image-Based Profiling of Cellular Morphological Responses to Small-Molecule Treatment. [Internet]. Journal of Biomolecular Screening 18:1321-1329 2013; Publisher's Version
Hartwell KA, Miller PG, Mukherjee S, Kahn AR, Stewart AL, Logan DJ, Negri JM, Duvet M, Järås M, Puram R, Dancik V, Al-Shahrour F, Kindler T, Tothova Z, Chattopadhyay S, Hasaka T, Narayan R, Dai M, Huang C, Shterental S, Chu LP, Haydu JE, Shieh JH, Steensma DP, Munoz B, Bittker JA, Shamji AF, Clemons PA, Tolliday NJ, Carpenter AE, Gilliland DG, Stern AM, Moore MAS, Scadden DT, Schreiber SL, Ebert BL, Golub TR. Niche-based screening identifies small-molecule inhibitors of leukemia stem cells [Internet]. Nature Chemical Biology 2013;9(12):840-848. Publisher's Version
March S, Ng S, Velmurugan S, Galstian A, Shan J, Logan DJ, Carpenter AE, Thomas D, Sim BK, Mota MM, Hoffman SL, Bhatia SN. A microscale human liver platform that supports the hepatic stages of Plasmodium falciparum and vivax. [Internet]. Cell Host & Microbe 2013;14(1):104–15. Publisher's Version
Shan J, Schwartz RE, Ross NT, Logan DJ, Thomas D, Duncan SA, North TE, Goessling W, Carpenter AE, Bhatia SN. Identification of small molecules for human hepatocyte expansion and iPS differentiation. [Internet]. Nature Chemical Biology 2013;9(8):514–520. Publisher's Version
Floyd SR, Pacold ME, Huang Q, Clarke SM, Lam FC, Cannell IG, Bryson BD, Rameseder J, Lee MJ, Blake EJ, Fydrych A, Ho R, Greenberger BA, Chen GC, Maffa A, Del Rosario AM, Root DE, Carpenter AE, Hahn WC, Sabatini DM, Chen CC, White FM, Bradner JE, Yaffe MB. The bromodomain protein Brd4 insulates chromatin from DNA damage signalling [Internet]. Nature 2013;498(7453):246–250. Publisher's Version
Kirienko NV, Kirienko DR, Larkins-Ford J, Wählby C, Ruvkun G, Ausubel FM. Pseudomonas aeruginosa disrupts Caenorhabditis elegans iron homeostasis, causing a hypoxic response and death. [Internet]. Cell Host Microbe, 13(4):406-16 2013; Publisher's Version
Pardo-Martin C, Allalou A, Medina J, Eimon PM, Wählby C, Faith Yanik M. High-throughput hyperdimensional vertebrate phenotyping [Internet]. Nat. Commun., 4:1467 2013; Publisher's Version
Ishaq O, Negri J, Bray MA, Pacureanu A, Peterson RT, Wählby C. Automated quanitification of zebrafish tail deformation for high-throughput drug screening. [Internet]. Protoc Int Symp Biomed Imaging: 902-905 2013; Publisher's Version