Publications by Year: 2014

2014
Du Z, Abedalthagafi M, Aizer AA, McHenry AR, Sun HH, Bray MA, Viramontes O, Machaidze R, Brastianos PK, Reardon DA, Dunn IF, Freeman GJ, Ligon KL, Carpenter AE, Alexander BM, Agar NY, Rodig SJ, Bradshaw EM, Santagata S. Increased expression of the immune modulatory molecule PD-L1 (CD274) in anaplastic meningioma [Internet]. Oncotarget 6(7):4704-16 2014; Publisher's Version PDF
Singh S, Bray MA, Jones TR, Carpenter AE. Pipeline for illumination correction of images for high-throughput microscopy [Internet]. Journal of Microscopy 256(3):231-236 2014; Publisher's Version
Rees P, Wills JW, Brown MR, Tonkin J, Holton MD, Hondow N, Brown AP, Brydson R, Millar V, Carpenter AE, Summers HD. Nanoparticle vesicle encoding for imaging and tracking cell populations. [Internet]. Nature Methods 11:1177-1181 2014; Publisher's Version
Sheik-Khalil E, Bray MA, Ozkaya S, Scarlatti G, Jansson M, Carpenter AE, Fenyo EM. Automated image-based assay for evaluation of HIV neutralization and cell-to-cell fusion inhibition [Internet]. BMC Infectious Diseases 14:472 2014; Publisher's Version
Khan IA, Fraser A, Bray MA, Smith PJ, White NS, Carpenter AE, Errington RJ. ProtocolNavigator: emulation based software for the design, documentation and reproduction biological experiments. [Internet]. Bioinformatics 30(23):344--3442 2014; Publisher's Version
Wawer MJ, Li K, Gustafsdottir SM, Ljosa V, Bodycombe NE, Marton MA, Sokolnicki KL, Bray MA, Kemp MM, Winchester E, Taylor B, Grant GB, Hon CSY, Duvall JR, Wilson JA, Bittker JA, Dančík V, Narayan R, Subramanian A, Winckler W, Golub TR, Carpenter AE, Shamji AF, Schreiber SL, Clemons PA. Toward performance-diverse small-molecule libraries for cell-based phenotypic screening using multiplexed high-dimensional profiling. [Internet]. PNAS. 111(30):10911-10916 2014; Publisher's Version
Wählby C, Lee Conery A, Bray MA, Kamentsky L, Larkins-Ford J, Sokolnicki KL, Veneskey M, Michaels K, Carpenter AE, O'Rourke EJ. High- and low-throughput scoring of fat mass and body fat distribution in C. elegans [Internet]. Methods 68(3):492-499 2014; Publisher's Version
Nieland TJF, Logan DJ, Saulnier J, Lam D, Johnson C, Root DE, Carpenter AE, Sabatini BL. High Content Image Analysis Identifies Novel Regulators of Synaptogenesis in a High-Throughput RNAi Screen of Primary Neurons. [Internet]. PLoS ONE 9(3):e91744 2014; Publisher's Version
Stanley SA, Barczak AK, Silvis MR, Luo SS, Sogi K, Vokes M, Bray MA, Carpenter AE, Siddiqi N, Rubin EJ, Hung DT. Identification of host-targeted small molecules that restrict intracellular Mycobacterium tuberculosis growth [Internet]. PLoS Pathogens 10(2):e1003946 2014; Publisher's Version
Chudnovsky Y, Kim D, Zheng S, Whyt WA, Bansal M, Bray MA, Gopal S, Theisen MA, Bilodeau S, Thiru P, Mitalipova M, Muffat J, Woolard K, Lee J, Nishimura R, Sakata N, Fine HA, Carpenter AE, Silver SJ, Verhaak RGW, Califano A, Young RA, Ligon KL, Mellinghoff IK, Root DE, Sabatini DM, Hahn WC, Chheda MG. ZFHX4 is a master regulator of NuRD core member CHD4 and regulates the glioblastoma tumor initiating cell state. [Internet]. Cell Reports 6(2):313-324 2014; Publisher's Version
Singh S, Carpenter AE, Genovesio A. Increasing the content of high-content screening: an overview [Internet]. Journal of Biomolecular Screening 19(5):640-650 2014; Publisher's Version
Majithia AR, Flannick J, Shahinian P, Guo M, Bray MA, Fontanillas P, Gabriel SE, Consortium GT2D, Pr NHGRI/FHSAS. Rare variants in PPARG with decreased activity in adipocyte differentiation are associated with increased risk of type 2 diabetes [Internet]. PNAS 2014; 111(36):13127-13132. Publisher's Version
PMID: 1410428111 PMCID: PMC25157153