Publications by Year: 2015

Jeong Y-M, Duanting Z, Hennig H, Samanta A, Agrawalla BK, Bray M-A, Carpenter AE, and Chang Y-T. 2015. “CDy6, a photostable probe for long-term real-time visualization of mitosis and proliferating cells.” Chemistry and Biology.22(2):299-307. Publisher's Version
Arganda-Carreras I, Turaga SC, Berger DR, Cireşan D, Giusti A, Gambardella LM, Schmidhuber J, Laptev D, Dwivedi S, and Buhmann JM. 2015. “Crowdsourcing the creation of image segmentation algorithms for connectomics.” Frontiers in Neuroanatomy 9:00142.
Singh S, Wu X, Ljosa V, Bray MA, Piccioni F, Root DE, Doench JG, Boehm JS, and Carpenter AE. 2015. “Morphological profiles of RNAI-induced gene knockdown are highly reproducible but dominated by seed effects.” PLoS One 10(7): e(0131370). Publisher's Version
Metelo AM, Noonan HR, Li X, Jin Y, Baker R, Kamentsky L, Zhang Y, Rooijen van E, Shin J, Carpenter AE, Yeh JR, Peterson RT, and Iliopoulous O. 2015. “Pharmacological HIF2α inhibition improves VHL disease-associated phenotypes in zebrafish model.” Journal of Clinical Investigation. 125(5):1987-1997. Publisher's Version
Logan DJ, Shan J, Bhatia SN, and Carpenter AE. 2015. “Quantifying co-cultured cell phenotypes in high-throughput using pixel-based classification.” Methods pii: S1046-2023(15)30170-5 . Publisher's Version
Gilad T, Bray MA, Carpenter AE, and Riklin Raviv T. 2015. “Symmetry-Based Mitosis Detection in Time-Lapse Microscopy. Paper presented at ISBI 2015 2015 International Symposium on Biomedical Imaging: From Nano to Macro.” In , 10th ed., 14: Pp. 40-16. Brooklyn Bridge, NY.
Arbelle A, Drayman N, Bray M, Alon U, Carpenter AE, and Riklin Raviv T. 2015. “Analysis of High-throughput Microscopy Videos: Catching Up with Cell Dynamics.” In Medical Image Computing and Computer-Assisted Intervention – MICCAI 2015., Pp. 218–225. Springer International Publishing. Publisher's Version
Bray M-A, Vokes MS, and Carpenter AE. 2015. “Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images.” Current Protocols in Molecular Biology. 109:14.17.1-14.17.13. Publisher's Version