Publications

2006
Chuang CH, Carpenter AE, Fuchsova B, Johnson T, de Lanerolle P, Belmont AS. Long-Range Directional Movement of an Interphase Chromosome Site. [Internet]. Current Biology, 16:1-7 2006; Publisher's Version
Moffat J, Grueneberg DA, Yang X, Kim SY, Kloepfer AM, Hinkle G, Piqani B, Eisenhaure TM, Luo B, Grenier JK, Carpenter AE, Foo SY, Stewart SA, Stockwell BR, Hacohen N, Hahn WC, Lander ES, Sabatini DM, Root DE. A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen. [Internet]. Cell, 124(6):1283-98 2006; Publisher's Version
Bailey SN, Ali SM, Carpenter AE, Higgins CO, Sabatini DM. Microarrays of lentiviruses for gene function screens in immortalized and primary cells. Nature Methods 2006;3(2):117-122. PDF
2005
Jones TR, Carpenter AE, Golland P. Voronoi-based segmentation of cells on image manifolds [Internet]. Computer Vision for Biomedical Image Applications (CVBIA) 2005 2005; Publisher's Version PDF
Wheeler DB, Carpenter AE, Sabatini DM. Cell microarrays and RNA interference chip away at gene function [Internet]. Nature Genetics 2005;37(Supplement):S25-S30. Publisher's Version PDF
Verschure PJ, van der Kraan I, de Leeuw W, van der Vlag J, Carpenter AE, Belmont AS, van Driel R. In vivo HP1 targeting causes large-scale chromatin condensation and enhanced histone lysine methylation. [Internet]. Molecular and Cellular Biology 2005;25(11):4552-4564. Publisher's Version
Rai D, Frolova A, Frasor J, Carpenter AE, Katzenellenbogen BS. Distinctive actions of membrane-targeted versus nuclear localized estrogen receptors in breast cancer cells. [Internet]. Molecular Endocrinology 2005;19(6):1606-1617. Publisher's Version PDF
Carpenter AE, Memedula S, Plutz MJ, Belmont AS. Common effects of acidic activators on large-scale chromatin structure and transcription [Internet]. Molecular and Cellular Biology 2005;25(3):958-968. Publisher's Version
2004
Wheeler DB, Bailey SN, Guertin DA, Carpenter AE, Higgins CO, Sabatini DM. RNAi living-cell microarrays for loss-of-function screens in Drosophila melanogaster cells. Nature Methods 2004;1(2):127-132. PDF download News&Views article referring to this work download blurb referring to this work
Carpenter AE, Ashouri A, Belmont AS. Automated microscopy identifies estrogen receptor subdomains with large-scale chromatin structure unfolding activity [Internet]. Cytometry A 2004;58A(2):157-166. Publisher's Version
Carpenter AE, Sabatini DM. Systematic genome-wide screens of gene function [Internet]. Nature Reviews Genetics 2004;5(1):11-22. Publisher's Version PDF
Direct visualization of transcription factor-induced chromatin remodeling and cofactor recruitment in vivo
Carpenter AE, Belmont AS. Direct visualization of transcription factor-induced chromatin remodeling and cofactor recruitment in vivo [Internet]. Methods in Enzymology 2004;375:366-381. Publisher's Version PDF
2003
Nye AC. Effects of Transcriptional Activators on Large-Scale Chromatin Structure. 2003; download thesis as Word document
Nye AC, Rajendran RR, Belmont AS. Chromosomes and Chromatin. In: Cooper DN Nature Encyclopedia of the Human Genome. London: Nature Publishing Group; 2003 p. 766-773. PDF
Rajendran RR, Nye AC, Frasor J, Balsara RD, Martini PGV, Katzenellenbogen BS. Regulation of nuclear receptor transcriptional activity by a novel DEAD box RNA helicase (DP97) [Internet]. Journal of Biological Chemistry 2003;278(7):4628-4638. Publisher's Version
2002
Nye AC, Rajendran RR, Stenoien DL, Mancini MA, Katzenellenbogen BS, Belmont AS. Alteration of large-scale chromatin structure by estrogen receptor [Internet]. Molecular and Cellular Biology 2002;22(10):3437-3449. Publisher's Version
2001
Ye Q, Hu YF, Zhong H, Nye AC, Belmont AS, Li R. BRCA1-induced large-scale chromatin unfolding and allele-specific effects of cancer-predisposing mutations [Internet]. Journal of Cell Biology 2001;155(6):911-921. Publisher's Version
Stenoien DL, Nye AC, Mancini MG, Patel K, Dutertre M, O’Malley BW, Smith CL, Belmont AS, Mancini MA. Ligand-mediated assembly and real-time cellular dynamics of estrogen receptor alpha-coactivator complexes in living cells [Internet]. Molecular and Cellular Biology 2001;21(13):4404-4412. Publisher's Version
2000
Nye AC, Rajendran RR, Katzenellenbogen BS, Belmont AS. The estrogen receptor alters large-scale chromatin structure. Trends in Cell Biology GFP in Motion CD-ROM, volume 2, ed. B Ludin and A Matus. 2000;
[movie (sorry, it doesn't always work)][abstract][background]
1999
Belmont AS, Dietzel SD, Nye AC, Tumbar T, Strukov Y. Large scale chromatin structure and function [Internet]. Current Opinion in Cell Biology 1999;11(3):307-311. Publisher's Version PDF

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